For the first time since the protectorate was founded, the NRA victory in 1986 gave a predominantly southern cast to both the new political and the new military rulers of Uganda. For reasons of climate, population, and colonial economic policy, parts of the south, particularly Buganda, had develÍÍÍÍoped economically more rapidly than the north (see The Colonial Era , ch. 1). Until the railroad was extended from the south, cotton could not become an established cash crop in the north. Instead, early in the colonial period, northerners established a pattern of earning a cash income through labor on southern farms or through military service. Although there had never been a political coalition that consisted exclusively, or even predominantly, of southerners or northerners, the head of the government had come from the north for all but one of the preceding twenty-three years of independence, and each succeeding army's officers and recruits were predominantly northerners. Northerners feared southern economic domination, while southerners chafed under what they considered northern political and military control. Thus, the military victory of the NRA posed a sobering political question to both northerners and southerners: was the objective of its guerrilla struggle to end sectarianism, as the Ten-Point Program insisted, or to end northern political domination?

In the first few days following the NRA takeover of Kampala in January 1986, there were reports of incidents of mob action against individual northerners in the south, but the new government took decisive steps to prevent their repetition. By the end of March, NRA troops had taken military control of the north. A period of uneasy calm followed, during which northerners considered their options. Incidents of looting and rape of northern civilians by recently recruited southern NRA soldiers, who had replaced better disciplined but battle-weary troops, intensified northerners' belief that southerners would take revenge for earlier atrocities and that the government would not stop them. In this atmosphere, the NRA order in early August 1986 for all soldiers in the former army, the Uganda National Liberation Army (UNLA), to report to local police stations gave rise to panic. These soldiers knew that during the Obote and Amin governments such an order was likely to have been a prelude to execution. Instead of reporting, many soldiers joined rebel movements, and a new round of civil wars began in earnest (see The Rise of the National Resistance Army , ch. 5).

Although the civil wars occurred in parts of the east as well, they sharpened the sense of political cleavage between north and south and substantiated the perception that the NRM was intent on consolidating southern domination. Rebels killed some local RC officials because they were the most vulnerable representatives of the NRM government. Because war made northern economic recovery impossible, new development projects were started only in the south 3bd. And bebecause cash crop production in the north was also impossible, the income gap between the two areas widened. Most government officials sent north were southerners because the NRA officer corps and the public service were mostly southern. By mid-1990, the NRA had gained the upper hand in the wars in the north, but the political damage had been done. The NRM government had become embroiled in war because it had failed to persuade northerners that it had a political program that would end regional domination. And its military success meant that for some time to come its response to all political issues would carry that extra burden of suspicion.

Data as of December 1990